require software list

provid binary software list

• seqkit
• maff
• KaKs_Calculator 2.0
• ParaAT2.0

Must be install software by yourself

• jcvi
• Rscript
• Python3

If your input is genome.fa and genome.gff3, you need to run genome2cdspep.sh first. This script relies on gffread

Check whether dependent software has been successfully installed or configured

bash check_ENV.sh

• If the last line of output is All require software pass the check!, it means that all dependent software has been installed.
• If there is an error message in the output, please install the corresponding dependent software.